.codacy.yml
.coveragerc
.gitattributes
.gitignore
.landscape.yml
.pyup.yml
.travis.yml
CHANGELOG.rst
LICENSE.txt
MANIFEST.in
README.rst
requirements.txt
setup.cfg
setup.py
aakbar/__init__.py
aakbar/__main__.py
aakbar/common.py
aakbar/config.py
aakbar/core.py
aakbar/plot.py
aakbar/search.py
aakbar/simplicity.py
aakbar/test.py
aakbar/version.py
aakbar.egg-info/PKG-INFO
aakbar.egg-info/SOURCES.txt
aakbar.egg-info/dependency_links.txt
aakbar.egg-info/entry_points.txt
aakbar.egg-info/not-zip-safe
aakbar.egg-info/requires.txt
aakbar.egg-info/top_level.txt
aakbar/test/README.txt
aakbar/test/calculate_signatures.sh
aakbar/test/genbank_downloader.sh
aakbar/test/split.sh
aakbar/test/strep10.sh
aakbar/test/Streptococcus_infantis/protein.faa
aakbar/test/Streptococcus_mutans/protein.faa
aakbar/test/Streptococcus_pneumoniae/protein.faa
aakbar/test/Streptococcus_porcinus/genome-200-bp_reads-first2000.fna
docs/Makefile
docs/aakbar.rst
docs/akbar-the-great.jpg
docs/conf.py
docs/index.rst
docs/modules.rst